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where you can get and compare decoy models with your query protein
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Retrieve/build decoy models for a query structure

Enter the PDB code of a protein View list of modeled PDB-chains

Specify the chain of interest (chains are case-sensitive, if no chain is specified, the first chain of the structure is taken)


Change default modeling parameters





- OR -



  • SELECT GROUPS OF PDB CHAINS ACCORDING TO CATH, SCOP AND PFAM ANNOTATION, EC NUMBER, GO TERM, ETC.



  • - OR -



    Upload a protein structure (if not stored in the PDB, make sure it does not contain dots, brackets, spaces or any other unsafe character)


    Specify the chain of interest (chains are case-sensitive, if no chain is specified, the first chain of the structure is taken)


    Change default modeling parameters


    Visits

    Build a single homology model and compare it with the templates used

    Upload a FASTA-formatted sequence (make sure it does not contain dots, brackets, spaces or any other unsafe character) -- Note that the fasta file name has to be THE SAME as the one specified INSIDE such file


    Or paste it directly here:


    Change default modeling parameters


    mappON and MAP

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    MAPweb: (About)




    IF YOU CANNOT SEE THE APPLET ABOVE, YOU SHOULD REFER TO:
    http://jmol.sourceforge.net/index.en.html
    Last modified: May 14th 2012